2 2
3  0.949 0.702 1397.712 1.097 0.706 1497.713 1.241 0.721 1000000000.000
4 0 1 2 3
1 0
1 4
1 13
1 29
1 43
1 59
1 104
1 115
0 147
1 147
0
200
134
4	0	TRYP #num good tryp terminals
3	-1e+09	0	1
4	-0.51547356	-1.2627659	-0.68072537	1.4507821
5	0	TRYP #num missed tryp terminals
3	-1e+09	0	1
4	0.19320336	0.29166966	-0.25498673	-0.25701325
10	0	TRYP AA at N-terminal When C-term is R
4	-1e+09	6	17	19
5	0	0	0.1099927	0.038558383	0
11	0	TRYP AA at N-terminal When C-term is K
4	-1e+09	6	7	22
5	-0.05187577	-0.0067213974	0	-0.11611722	-0.089282506
12	0	TRYP AA at N-terminal When C-term is other
3	-1e+09	12	22
4	0.065397122	0.065397122	0	0.065397122
13	0	ANN PEAK diff from org pm_with_19
11	-1e+09	-3.3762207	-2.7619629	-2.1390381	-1.7113037	-0.78918457	-0.71105957	-0.34228516	-0.18371582	0.26525879	0.51391602
12	-0.7206844	-1.0116612	0.45803021	0.91663162	0.87875098	0.81766796	0.7484346	0.70938627	0.61069152	0.45392208	-0.0366761	-0.1184769
14	0	ANN PEAK # aas in peptide
3	-1e+09	11	13
4	0.048322342	0.048322342	-0.053485979	0.048322342
15	0	ANN PEAK %ann intensity
6	-1e+09	0.17874664	0.27486047	0.33812523	0.57060754	0.62946004
7	0.081507283	0.081507283	0.078263432	-0.0020378876	-0.081068198	0.068356911	0.081507283
16	0	ANN PEAK %ann peaks
8	-1e+09	0.1574074	0.2038835	0.25961539	0.27777779	0.28712872	0.31868133	0.34444445
9	0.06218781	-0.19655963	-0.2735843	-0.18645359	-0.12815779	0.061706365	0.12170543	0.18355924	0.2922655
17	0	ANN PEAK #ann in top 25
5	-1e+09	6	8	9	11
6	-0.023446141	-0.14468143	-0.11943309	-0.072077999	-0.052946306	0.11634973
18	0	ANN PEAK #ann in top half (up to 50)
3	-1e+09	18	19
4	-0.0045170269	-0.069354715	0.043660102	0.070714303
19	0	ANN PEAK #ann in top third - #ann in mid third
4	-1e+09	-1	6	7
5	0.020265403	0.020265403	-0.024819697	-0.022715456	0.020265403
20	0	ANN PEAK #ann in top third - #ann in last third
4	-1e+09	5	7	10
5	-0.0037865303	-0.0037865303	0.0041011193	0.00074831796	-0.0037865303
21	0	ANN PEAK #ann in mid third - #ann in last third
4	-1e+09	-4	4	7
5	-0.0091386672	-0.0091386672	-0.038216416	0.040766977	-0.0091386672
22	0	ANN PEAK #y annotated
5	-1e+09	3	6	7	8
6	0.0072568362	0.0072568362	-0.1472266	-0.080623676	-0.0083994088	0.073859757
23	0	ANN PEAK #b annotated
2	-1e+09	5
3	-0.002411349	-0.019787247	0.01178579
24	0	ANN PEAK #b-H2O annotated
3	-1e+09	1	3
4	0.0088477353	0.0088477353	-0.0083771859	0.0088477353
26	0	ANN PEAK #y-H2O annotated
4	-1e+09	0	2	4
5	0.01480536	0.01480536	-0.015509653	-0.0099915454	0.01480536
27	0	ANN PEAK #b2 annotated
3	-1e+09	0	1
4	0.12712083	0.12712083	-0.13075941	0.12712083
28	0	ANN PEAK #a annotated
3	-1e+09	0	2
4	0.025996738	0.025996738	-0.027022116	0.025996738
29	0	INTEN BAL c_idx - n_idx
5	-1e+09	5	8	9	10
6	-0.072050786	-0.11394509	0.05915709	0.073309459	0.11783421	-0.022261093
30	0	INTEN BAL RHK N
3	-1e+09	1	2
4	0.062597789	0.1006459	0.015208576	0
31	0	INTEN BAL RHK C
3	-1e+09	3	4
4	0.082225264	0.082225264	0	0.082225264
32	0	INTEN BAL RHK pair
3	-1e+09	0	2
4	0.021427385	0	0.018884114	0.039696175
36	0	INTEN BAL prefix prop, pair +2,+3
4	-1e+09	0.33488908	0.46466765	0.69096637
5	0.073698709	0.073698709	0.0044826084	-0.026607634	0.073698709
40	0	INTEN BAL all prefix prop, pair -1,0,+1
4	-1e+09	0.051512927	0.09647993	0.61226022
5	0.015856132	0.015856132	-0.049189023	-0.053847457	0.015856132
42	0	INTEN BAL all prefix prop, pair +4,+5
3	-1e+09	0.052464843	0.45683873
4	0	0	0.006210947	0
43	0	PEAK OFF y num frags detected
4	-1e+09	3	7	8
5	0.059797943	0.059797943	-0.053688247	-0.013009665	0.059797943
44	0	PEAK OFF y max self offset
4	-1e+09	0.16380692	0.22095871	0.28660965
5	0.066078491	0.11651762	0.26308498	0.30649303	0
45	0	PEAK OFF y avg self offset
7	-1e+09	0.090880074	0.095441818	0.10509109	0.1224184	0.14611587	0.15685654
8	0.1701835	0.34137769	0.32623803	0.3114268	0.11134888	0.10360637	0.068343445	0
47	0	PEAK OFF y avg consecutive offset
9	-1e+09	0.056926727	0.064984642	0.084826149	0.10313634	0.13632813	0.17351684	0.18573506	0.27719116
10	0.12614345	0.12614345	0.15633569	0.17114475	0.21382356	0.16635153	0.1527554	0.014907707	0	0.12614345
48	0	PEAK OFF y grab offset #1
3	-1e+09	0.055541992	0.28100586
4	0	0	-0.021405758	0
49	0	PEAK OFF y grab offset #2
3	-1e+09	0.022155762	0.23193359
4	-0.00098668762	-0.00098668762	0	-0.00098668762
51	0	PEAK OFF b num frags detected
4	-1e+09	0.30516326	2	6
5	0	0	-0.046984229	-0.013353661	0
52	0	PEAK OFF b max self offset
5	-1e+09	0.13996613	0.19346893	0.28563201	0.34071076
6	-0.036617207	-0.036617207	-0.022989668	0.047704082	0.036424773	-0.036617207
53	0	PEAK OFF b avg self offset
5	-1e+09	0.099413753	0.10499328	0.13645773	0.16310565
6	0.20142689	0.20142689	0.027552249	0	0.14986573	0.20142689
54	0	PEAK OFF b max consecutive offset
3	-1e+09	0.20227051	0.21374512
4	0.0069619441	0.01472565	0.0051063116	0
55	0	PEAK OFF b avg consecutive offset
3	-1e+09	0.12038749	0.15725708
4	0.057034978	0.057034978	0	0.057034978
56	0	PEAK OFF b grab offset #1
3	-1e+09	0.10083008	0.24133301
4	0.071734314	0.094018308	0	0.05018479
57	0	PEAK OFF b grab offset #2
4	-1e+09	0.043701172	0.051879883	0.31445312
5	0	0	0.0028196358	0.10271473	0
58	0	PEAK OFF b grab offset #3
4	-1e+09	0.011962891	0.12097168	0.234375
5	0	0	0.1798293	0.17818225	0
59	0	PEP COMP start cat N (len 3)
3	-1e+09	5	7
4	-0.016912808	-0.036519212	0.032175358	0.005340139
60	0	PEP COMP end cat C (len 3)
4	-1e+09	5	11	17
5	-0.077894162	-0.077894162	0.089148953	-0.03386039	-0.077894162
62	0	PEP COMP len 3 # cat 15-18
2	-1e+09	3
3	-0.00061353504	-0.019817265	0.019944126
63	0	PEP COMP len 3 # cat 7-14
3	-1e+09	0	1
4	0.057403576	0.057403576	-0.057842378	0.057403576
64	0	PEP COMP len 3 # cat 3-6
3	-1e+09	1	3
4	-0.013207506	-0.013207506	0.01035832	-0.013207506
67	0	PEP COMP avg cat, len 3
6	-1e+09	3.4166667	3.7692308	5.25	6.6923075	9.5
7	-0.011960169	-0.011960169	-0.00083775648	0.047697813	0.057404675	-0.06859323	-0.011960169
68	0	PEP COMP before cat score 1
5	-1e+09	8	11	12	15
6	0.09920535	0.18479568	0.28872108	0.17203475	0.15294352	0
69	0	PEP COMP after cat score 1
6	-1e+09	8	9	15	17	19
7	0.21433802	0.3144805	0.29212546	0.25278525	0.30726752	0.044626881	0.12162227
71	0	PEP COMP before cat score 2
4	-1e+09	3	14	16
5	0	0	0.05600822	0.033730019	0
72	0	PEP COMP after cat score 2
3	-1e+09	4	14
4	0.053151964	0.053151964	0	0.053151964
73	0	PEP COMP span cat score 2
4	-1e+09	3	7	19
5	0	0	0.12135817	0.042018467	0
74	0	PEP COMP before cat score 3
7	-1e+09	5	9	12	14	16	19
8	0.049886606	0.049886606	0.21294113	0.10911521	0.13350895	0.15767757	0.15900181	0.049886606
75	0	PEP COMP after cat score 3
3	-1e+09	12	18
4	0	0	0.062020975	0
76	0	PEP COMP span cat score 3
4	-1e+09	7	10	19
5	0	0	0.03071223	0.070895596	0
77	0	PEP COMP before cat score 4
3	-1e+09	-1	9
4	0.014149909	0.038204655	0.10493566	0
78	0	PEP COMP after cat score 4
4	-1e+09	-1	18	19
5	0	0	0.029838817	0.018119082	0
79	0	PEP COMP span cat score 4
3	-1e+09	5	19
4	0	0	0.18244427	0
80	0	PEP COMP #aa A
1	-1e+09
2	0	0.23747978
82	0	PEP COMP #aa N
1	-1e+09
2	0	0.074299987
85	0	PEP COMP #aa Q
2	-1e+09	1
3	-0.027008575	-0.070374397	-0.12670313
86	0	PEP COMP #aa E
2	-1e+09	1
3	-0.019678705	-0.016296389	-0.06224131
87	0	PEP COMP #aa G
1	-1e+09
2	0	0.14845774
89	0	PEP COMP #aa L
2	-1e+09	1
3	0.026467293	0.026467293	0
90	0	PEP COMP #aa K
2	-1e+09	1
3	0	0	-0.15846792
93	0	PEP COMP #aa P
2	-1e+09	1
3	0.017216277	0.17798943	0.21367418
94	0	PEP COMP #aa S
2	-1e+09	1
3	0	0	-0.072571139
99	0	PEP COMP #problematic double combos
2	-1e+09	1
3	-0.036317512	-0.036317512	0
104	0	PMCSQS sqs prob for peptide charge
8	-1e+09	0.56962246	0.86597651	0.89311618	0.91505033	0.9550873	0.98931926	0.99206358
9	-0.019695588	0.30296767	0.19381416	0.12264041	0.031134968	-0.050098873	-0.12282022	-0.15506384	-0.28217843
105	0	PMCSQS prob for peptide charge
6	-1e+09	0.99005961	0.99262881	0.99606639	0.99846268	0.99918967
7	-0.018216164	0.19072321	0.076427863	0.02064306	-0.019402772	-0.21031817	-0.22798283
106	0	PMCSQS mass diff from pm1, prob>0.95
7	-1e+09	-1.0048828	-0.74938965	-0.22998047	-0.10253906	0.14819336	1.7121582
8	-0.5625274	-0.5625274	-0.41979278	0.020026197	0.033957841	-0.0064894373	-0.099590478	-0.5625274
107	0	PMCSQS mass diff from pm1, prob<=0.95
3	-1e+09	-0.27856445	0.86914062
4	-0.043618909	-0.043618909	0.072384131	-0.043618909
108	0	PMCSQS score1 for peptide charge
7	-1e+09	4.5360403	4.9869642	5.25315	5.4492121	5.5901246	6.2839251
8	0.078579149	0.6643031	0.36358229	0.20708255	0.039531152	-0.22310033	-0.44044386	-0.60459149
109	0	PMCSQS score2 for peptide charge
8	-1e+09	4.0565124	4.4082227	4.6684599	4.7312522	4.9190488	5.3001976	5.6215692
9	-0.13108903	-0.068412766	-0.11083057	-0.042417803	-0.13887319	-0.21677374	-0.27720268	-0.25057407	-0.20149092
110	0	PMCSQS mass diff from pm2
3	-1e+09	0.90539551	1.9052734
4	-0.087377975	-0.087377975	0	-0.087377975
111	0	PMCSQS max  prob for other charges
3	-1e+09	0.00037590822	0.0014964938
4	-0.0026755127	-0.035555815	-0.014739294	0.032645724
112	0	PMCSQS score diff from max score with this charge, prob>=0.95
3	-1e+09	7.4104109	7.6742277
4	-0.01331616	0.012455135	-0.024735797	-0.054922695
115	0	PRM N/C delta mass
4	-1e+09	0	3.0517578e-05	3.8146973e-05
5	-0.052988091	-0.052988091	0.054816306	-0.0039580296	-0.052988091
116	0	PRM N/C total breakage score
4	-1e+09	-85.601715	-14.088515	42.3573
5	0.042329945	0.042329945	0.024320212	-0.034220466	0.042329945
117	0	PRM N/C average breakage score
5	-1e+09	-13.875737	-2.2996926	2.4843276	7.3472247
6	0.00398125	0.00398125	-0.011785636	-0.069622013	0.004639777	0.00398125
118	0	PRM N/C normalized average breakage score
4	-1e+09	-7.5628576	-1.2130476	7.240644
5	0	0	-0.035801577	-0.056576109	0
123	0	PRM num breakage scores
7	-1e+09	4	6	7	8	9	10
8	0.013689047	-0.72100621	-0.7839179	-0.74290351	-0.31434508	0.24920642	0.62378614	0.6916115
124	0	PRM breakage score min 1
5	-1e+09	-45.280071	-20.685328	-7.8297997	-6.3882909
6	0.049217564	0.02792974	0	0.047777096	0.05539247	0.065239804
125	0	PRM breakage score min 2
5	-1e+09	-11.658085	-10.144173	-2.4007039	6.3171697
6	0	0	0.020505685	0.080162883	0.0088693869	0
126	0	PRM breakage score min 3
8	-1e+09	-14.869894	-2.6120319	-0.44710582	4.2032967	5.0158277	5.8117051	7.5776405
9	-0.05628518	-0.05628518	0.13785646	0.16404021	0.21720368	0.14321307	-0.034666622	-0.049558909	-0.05628518
127	0	PRM breakage score min consecutive 3
4	-1e+09	-59.172516	-22.97591	22.189831
5	0.065088528	0.065088528	0	0.07259135	0.065088528
129	0	PRM breakage score min consecutive 2
5	-1e+09	-51.182434	-40.972672	-1.1794884	1.066175
6	0.10091578	0.10091578	0.043283541	-0.079076838	0.0026698772	0.10091578
130	0	PRM breakage score max consecutive 2
7	-1e+09	-12.102985	17.538363	22.496311	24.032362	31.28307	32.742424
8	-0.041966621	-0.041966621	0.096961628	0.029109825	0.025400139	-0.078696572	-0.042637187	-0.041966621
132	0	PRM #breakage scores 0 - -10
3	-1e+09	0	2
4	0.030596983	0.030596983	-0.039543884	0.030596983
133	0	PRM #breakage scores 0 - 8
2	-1e+09	2
3	-0.0017093886	-0.017471588	0.01771829
136	0	PRM %breakage scores below -10
2	-1e+09	0.125
3	0.11528195	0.26021823	0
137	0	PRM %breakage scores below 0
4	-1e+09	0.16666667	0.2857143	0.66666669
5	0	0	0.056742865	0.033462012	0
139	0	PRM %breakage scores above 8
5	-1e+09	0	0.375	0.40000001	0.60000002
6	0.021240982	0.021240982	0.040999239	0.033960671	0	0.021240982
140	0	PRM Score connected to N-terminal
5	-1e+09	-4.1564817	-1.0028912	0.17572013	11.797566
6	0.014475434	-0.015390186	-0.0020581808	0.028889502	0.06861446	0.046212831
142	0	PRM %breakages with 1 frag detected
3	-1e+09	0.125	0.16666667
4	-0.0023207672	-0.0023207672	0.0013264269	-0.0023207672
143	0	PRM %breakages with 2 frag detected
5	-1e+09	0.090909094	0.1	0.11111111	0.33333334
6	-0.065365401	-0.065365401	0.051855544	0.065483666	0.07570212	-0.065365401
145	0	PRM %breakages with dual orientation frags
3	-1e+09	0.41666669	0.69230771
4	-0.022542703	-0.022542703	0.020857783	-0.022542703
148	0	COMP PPP frag 1 obs_ratio
7	-1e+09	0.16666667	0.22222222	0.41666666	0.54545456	0.58333331	0.66666669
8	0.054880799	0.054880799	-0.02479694	-0.059438736	-0.062042819	0.044916945	0.065844248	0.054880799
150	0	COMP PPP frag 3 obs_ratio
5	-1e+09	0.16666667	0.18181819	0.25	0.33333334
6	0.032108692	0.032108692	0.025118857	0.011256619	-0.029338889	0.032108692
153	0	COMP PPP PARTMOBILE sum ranks of missed 1-5
5	-1e+09	13	20	39	61
6	0.29606076	0.29606076	0.19049746	0.10771394	0	0.29606076
155	0	COMP PPP sum ranks of missed 1-5
9	-1e+09	17	27	29	39	51	59	68	88
10	-0.42128416	-2.0807193	-2.0975496	-1.8931668	-1.7836243	-0.84929568	-0.50400868	-0.37224016	-0.36925112	-0.12784526
160	0	COMP PPP MOBILE sum ranks of missed 11-15
5	-1e+09	110	115	152	187
6	0	0	0.092211056	0.1198447	0.090081667	0
161	0	COMP PPP PARTMOBILE sum ranks of missed 11-15
3	-1e+09	91	153
4	0.1015944	0.1015944	0	0.1015944
163	0	COMP PPP sum ranks of missed 11-15
3	-1e+09	95	114
4	0.014850673	-0.054381152	-0.023833459	0.066004609
164	0	COMB PPP observed rank of predicted rank 1
5	-1e+09	2	3	5	7
6	0.026969515	0.15974569	0.048512825	-0.0088323004	-0.056541025	-0.084923299
165	0	COMB PPP observed rank of predicted rank 2
4	-1e+09	0	2	4
5	-0.045671559	0.026351012	0.090952133	0.028368536	-0.12024775
167	0	COMB PPP observed rank of predicted rank 4
3	-1e+09	0	6
4	-0.048442971	-0.048442971	0.037400575	-0.048442971
168	0	COMB PPP observed rank of predicted rank 5
4	-1e+09	1	7	9
5	-0.02114154	-0.02114154	0.0076535061	-0.012368646	-0.02114154
170	0	COMB PPP observed rank of predicted rank 7
2	-1e+09	8
3	0.0045489624	0.041345806	-0.04580053
171	0	COMB PPP predicted rank of observed rank 1
2	-1e+09	4
3	0.0023030594	0.043732772	-0.041167897
172	0	COMB PPP predicted rank of observed rank 2
4	-1e+09	3	12	24
5	0.15366963	0.15366963	-0.047706874	-0.15350763	0.15366963
173	0	COMB PPP predicted rank of observed rank 3
3	-1e+09	4	15
4	0.004073037	0.05581903	0.0218604	-0.034552463
174	0	COMB PPP predicted rank of observed rank 4
3	-1e+09	1	11
4	0	0	0.0021688517	0
175	0	COMB PPP predicted rank of observed rank 5
3	-1e+09	6	24
4	-0.003982522	-0.003982522	0.0072738893	-0.003982522
176	0	COMB PPP predicted rank of observed rank 6
5	-1e+09	1	8	22	29
6	-0.015991124	-0.015991124	0.041891965	-0.025307357	-0.036579611	-0.015991124
177	0	COMB PPP predicted rank of observed rank 7
5	-1e+09	1	17	29	32
6	-0.026351248	-0.026351248	0.056583905	-0.056827641	-0.042631	-0.031506186
178	0	COMB PPP rank of missed #1
6	-1e+09	1	2	3	6	9
7	-0.010804063	-0.24587971	-0.16265006	-0.11682001	0.041946321	0.041617589	0.037130033
179	0	COMB PPP rank of missed #3
4	-1e+09	2	5	11
5	0	-0.0060545705	-0.11811827	-0.095368916	0
182	0	COMB PPP rank of missed #9
4	-1e+09	14	19	21
5	-0.14390395	-0.3362919	-0.23278629	-0.14385435	0
183	0	COMB PPP rank of missed #11
3	-1e+09	22	27
4	-0.030732568	-0.11481963	-0.053447898	0
184	0	COMB PPP rank of missed #13
4	-1e+09	22	23	36
5	-0.020266592	-0.066884379	0.0011370394	0.012729633	-0.0012403807
185	0	COMB PPP rank of missed #15
2	-1e+09	23
3	0.011265765	-0.022718427	0.03786006
187	0	COMB PPP delta score #1
4	-1e+09	0.34617996	1.768816	2.920018
5	-0.042044706	0	-0.058758134	-0.092805262	-0.087652905
188	0	COMB PPP delta score #2
6	-1e+09	-0.17878246	1.2409077	1.4043541	1.5749512	2.3545914
7	-0.06112655	-0.06112655	0	-0.016880239	-0.03133742	-0.060469266	-0.06112655
189	0	COMB PPP delta score #3
5	-1e+09	-0.84003448	0.50822067	0.79336357	1.5746403
6	0.014754518	0.031221991	0.25779992	0.072868103	0.051390181	0
190	0	COMB PPP delta score #4
6	-1e+09	-0.1447506	0.31941605	1.0285072	1.6643839	1.8426046
7	0.11750935	0.20820377	0.18371542	0.23428083	0.24401193	0.17066119	0.02448835
191	0	COMB PPP delta score #5
7	-1e+09	-1.0957355	-0.4429512	0.84480476	1.2890987	1.4487381	1.6163273
8	0.042620985	0.10341661	0.31795702	0.32453473	0.34358886	0.13337325	0.10197323	0
192	0	COMB PPP delta score #6
7	-1e+09	-1.1787672	-0.27727413	0.27388954	0.41138268	1.2612629	1.4181786
8	0.074548542	0.074548542	0.12863372	0.054085177	0.056564653	0.17330949	0.12781478	0.074548542
193	0	COMB PPP delta score #7
6	-1e+09	-0.8098259	1.2408895	1.3916788	1.5527172	2.3453388
7	0.1291856	0.1291856	0.24792435	0.23349946	0.090430945	0	0.1291856
194	0	COMB PPP dot prod pred-obs top 15
8	-1e+09	0.48062581	0.60128558	0.69004679	0.71806103	0.75174516	0.78672767	0.85862017
9	0.023742329	-0.26675304	-0.27283677	-0.21012981	-0.15641712	-0.028643518	0.036375045	0.043200638	0.11459084
195	0	COMB PPP dot prod obs-pred top 15
6	-1e+09	0.73216951	0.76174843	0.89938533	0.98109072	0.99343604
7	-0.026895047	-0.06933485	-0.049180067	-0.046852524	0.081595238	0.037875507	0.033447962
196	0	COMB PPP dot prod pred-obs top 30
4	-1e+09	0.5109359	0.52606666	0.6970557
5	0.0041682105	-0.019701845	-0.017848511	-0.012420731	0.016314427
197	0	COMB PPP dot prod obs-pred top 30
5	-1e+09	0.47504181	0.49423969	0.67556715	0.905159
6	-0.042209557	-0.042209557	0.032502303	0.041832479	0.058810891	-0.031289591
198	0	COMB PPP dot prod pred-obs top 45
4	-1e+09	0.43029621	0.52047676	0.56723666
5	0.0079002046	0.0079002046	0.010560868	-0.010974409	0.0079002046
