2 4
2  -0.648 0.727 2094.907 -0.535 0.718 1000000000.000
4 0 1 2 8
1 0
1 4
1 13
1 29
1 43
1 59
1 104
1 115
0 147
1 147
0
200
85
4	0	TRYP #num good tryp terminals
3	-1e+09	0	1
4	-0.55551542	-1.52221	-0.31800565	1.7669802
5	0	TRYP #num missed tryp terminals
3	-1e+09	0	1
4	0.16116072	0.31393399	0.01875472	-0.11521222
10	0	TRYP AA at N-terminal When C-term is R
3	-1e+09	6	10
4	0.0097916642	0.0097916642	0	0.0097916642
11	0	TRYP AA at N-terminal When C-term is K
3	-1e+09	6	22
4	0	0	-0.076935778	0
13	0	ANN PEAK diff from org pm_with_19
8	-1e+09	-3.2729492	-2.8093262	-1.869873	-0.50097656	0.029052734	0.25561523	0.48974609
9	-0.45588278	-1.0075262	0.99785307	1.073613	0.81829312	0.66007301	0.56253748	0.31069016	0.2839953
14	0	ANN PEAK # aas in peptide
4	-1e+09	16	18	20
5	0.046268224	-0.01733365	-0.12739955	-0.0073652124	0.12955736
15	0	ANN PEAK %ann intensity
5	-1e+09	0.27774039	0.36397624	0.49326345	0.5268091
6	0.0094925215	-0.13424671	-0.0069988946	0.11707242	0.13963197	0.16423765
16	0	ANN PEAK %ann peaks
3	-1e+09	0.21830986	0.27480915
4	-0.0017587592	-0.17133012	0.16634717	0.17168083
17	0	ANN PEAK #ann in top 25
2	-1e+09	6
3	0.0043012051	-0.015614099	0.015994057
18	0	ANN PEAK #ann in top half (up to 50)
3	-1e+09	19	23
4	0.0071496365	0.0071496365	-0.0067130521	0.0071496365
19	0	ANN PEAK #ann in top third - #ann in mid third
4	-1e+09	2	6	8
5	0.083444875	0.083444875	-0.066772834	0.07118977	0.083444875
21	0	ANN PEAK #ann in mid third - #ann in last third
3	-1e+09	1	4
4	0.027589927	0.027589927	-0.025136763	0.027589927
22	0	ANN PEAK #y annotated
3	-1e+09	6	7
4	-0.040889815	-0.090181382	0.088133907	0.12908488
23	0	ANN PEAK #b annotated
3	-1e+09	5	6
4	0.0058340977	-0.10534728	0.10307348	0.11773876
25	0	ANN PEAK #y2 annotated
3	-1e+09	1	2
4	9.329651e-05	-0.022676651	-0.0092922443	0.028209299
29	0	INTEN BAL c_idx - n_idx
3	-1e+09	7	11
4	0.00028706319	-0.030659078	-0.014544412	0.052180708
30	0	INTEN BAL RHK N
3	-1e+09	2	4
4	0.093694793	0.093694793	0	0.093694793
31	0	INTEN BAL RHK C
4	-1e+09	0	2	3
5	0.0023704154	0.0023704154	0.0084241381	0	0.0023704154
37	0	INTEN BAL prefix prop, pair +4,+5
4	-1e+09	0.18343249	0.32661361	0.51536787
5	0.14920709	0.14920709	0.14783165	0	0.14920709
43	0	PEAK OFF y num frags detected
3	-1e+09	6	7
4	-0.017095146	-0.086676627	0.011735301	0.065243972
44	0	PEAK OFF y max self offset
3	-1e+09	0.18333817	0.3032341
4	0	0	0.058227023	0
45	0	PEAK OFF y avg self offset
4	-1e+09	0.10024796	0.15764618	0.21615219
5	0.08025556	0.090130138	0.13203475	0	0.076618749
46	0	PEAK OFF y max consecutive offset
4	-1e+09	0.16137695	0.36181641	0.48059082
5	0.011050931	0.011050931	0.045887563	0	0.011050931
48	0	PEAK OFF y grab offset #1
4	-1e+09	0.020263672	0.13623047	0.15185547
5	0.091502986	0.091502986	0	0.028593298	0.091502986
49	0	PEAK OFF y grab offset #2
5	-1e+09	0.04296875	0.16308594	0.17700195	0.25134277
6	0.00055384291	0.00055384291	0.055996991	0.036305276	0.036859119	0.00055384291
52	0	PEAK OFF b max self offset
6	-1e+09	0.079864502	0.09793365	0.21910369	0.35570037	0.38121307
7	-0.065786155	-0.065786155	0.060399989	0.071514931	0.059297807	-0.020405778	-0.065786155
53	0	PEAK OFF b avg self offset
4	-1e+09	0.08605957	0.10103607	0.18214104
5	0	0	0.027231911	0.073540159	0
54	0	PEAK OFF b max consecutive offset
3	-1e+09	0.1463623	0.16674805
4	0.024732599	0	0.023050659	0.040139645
55	0	PEAK OFF b avg consecutive offset
5	-1e+09	0.073037282	0.096679688	0.13186646	0.16546631
6	0.36769689	0.31602694	0.38795778	0.071930838	0.37895374	0.38795778
59	0	PEP COMP start cat N (len 3)
3	-1e+09	1	17
4	-0.016532369	-0.028950141	0.028149743	0.0046879691
63	0	PEP COMP len 3 # cat 7-14
4	-1e+09	4	5	7
5	0.009239159	-0.047666919	0.038521041	0.050518446	0.055401911
65	0	PEP COMP len 3 # cat 1-2
3	-1e+09	4	5
4	-0.0019067738	0.12308652	-0.073852174	-0.097008811
67	0	PEP COMP avg cat, len 3
3	-1e+09	6.6666665	8.333333
4	-0.0056313518	-0.053802136	0.069470038	0.037171397
69	0	PEP COMP after cat score 1
2	-1e+09	17
3	0.099354885	0.19653092	0
72	0	PEP COMP after cat score 2
2	-1e+09	14
3	-0.0089643555	0.032114674	-0.048804931
73	0	PEP COMP span cat score 2
4	-1e+09	1	5	17
5	-0.030108481	-0.030108481	0.054977811	0.10013433	-0.030108481
75	0	PEP COMP after cat score 3
4	-1e+09	5	14	17
5	0.01579676	0.031155858	0.082218093	0.043666506	0
78	0	PEP COMP after cat score 4
3	-1e+09	15	19
4	0.015070436	0	0.065410577	0.03839153
79	0	PEP COMP span cat score 4
5	-1e+09	3	7	10	17
6	0	0	0.044264134	0.12139736	0.1521694	0
88	0	PEP COMP #aa H
1	-1e+09
2	0	0.046369454
90	0	PEP COMP #aa K
2	-1e+09	1
3	-0.00066316984	0	-0.0032888366
93	0	PEP COMP #aa P
1	-1e+09
2	0	0.052486136
95	0	PEP COMP #aa T
1	-1e+09
2	0	0.041693621
104	0	PMCSQS sqs prob for peptide charge
2	-1e+09	0.67000824
3	0.00031786789	0.18138634	-0.19582405
106	0	PMCSQS mass diff from pm1, prob>0.95
6	-1e+09	-0.83642578	-0.091552734	0.16479492	0.70141602	1.1755371
7	-0.5525952	-0.5525952	-0.19778455	-0.016841466	-0.16081267	-0.14397121	-0.5525952
108	0	PMCSQS score1 for peptide charge
10	-1e+09	4.1175318	4.3723297	4.5681901	4.7333064	4.8791018	5.0025849	5.1146612	5.3686371	5.4348378
11	-0.0089445883	0.68948313	0.68433039	0.60751135	0.49892677	0.14089825	-0.10000936	-0.39474516	-0.53924324	-0.63726257	-0.69564943
109	0	PMCSQS score2 for peptide charge
3	-1e+09	3.8584495	5.1086273
4	0.035888118	0.040864861	-0.037641666	0.030356707
110	0	PMCSQS mass diff from pm2
5	-1e+09	-2.1750488	-1.1086426	-0.44873047	1.3100586
6	-0.02400619	-0.02400619	0.054128685	0.11820086	0.12758668	-0.02400619
115	0	PRM N/C delta mass
4	-1e+09	-0.00011444092	-4.5776367e-05	-3.8146973e-05
5	-0.037225308	-0.037225308	0.02497783	-0.014032813	-0.037225308
121	0	PRM delta num breakage scores (missing)
6	-1e+09	4	5	11	12	13
7	0.04758858	0.04758858	-0.030501059	-0.03977627	-0.019807622	-0.014018835	0.04758858
123	0	PRM num breakage scores
6	-1e+09	6	7	8	9	10
7	-0.072010967	-0.85563398	-0.8009163	-0.67128235	-0.48573713	0.12746084	0.56473406
124	0	PRM breakage score min 1
4	-1e+09	-28.731358	-12.666288	-9.2174501
5	0.0065740169	0.0065740169	0.0055762828	0	0.0065740169
125	0	PRM breakage score min 2
2	-1e+09	-6.8418489
3	0.025124638	0	0.066534961
126	0	PRM breakage score min 3
3	-1e+09	-5.2170992	1.1562356
4	0	0	0.0046844593	0
133	0	PRM #breakage scores 0 - 8
3	-1e+09	2	3
4	-0.019197787	-0.12065087	0.017336784	0.069491224
134	0	PRM #breakage scores 8 - 15
2	-1e+09	3
3	-0.0057303054	-0.029572709	0.030398072
136	0	PRM %breakage scores below -10
5	-1e+09	0.090909094	0.125	0.2	0.33333334
6	0.12447433	0.19499263	0.14818803	0	0.011196744	0.029151233
138	0	PRM %breakage scores above 0
3	-1e+09	0.14285715	0.83333331
4	0.010194696	0.010194696	0	0.010194696
139	0	PRM %breakage scores above 8
3	-1e+09	0.27272728	0.40000001
4	0.02554761	0.02554761	0	0.02554761
142	0	PRM %breakages with 1 frag detected
4	-1e+09	0.1	0.125	0.375
5	-0.031854995	-0.031854995	-0.02126272	0.034116567	-0.031854995
143	0	PRM %breakages with 2 frag detected
2	-1e+09	0.16666667
3	-0.00046455726	-0.028102856	0.028837205
148	0	COMP PPP frag 1 obs_ratio
4	-1e+09	0.1875	0.375	0.5
5	0.11612469	0.11612469	-0.1207525	-0.1105063	0.11612469
150	0	COMP PPP frag 3 obs_ratio
4	-1e+09	0.0625	0.26666668	0.2857143
5	0.037876028	0.037876028	-0.043033614	-0.019287052	0.037876028
155	0	COMP PPP sum ranks of missed 1-5
6	-1e+09	26	29	38	53	62
7	-1.7053482	-1.737987	-1.6767863	-1.4758221	-0.1215956	-0.0058368627	0
159	0	COMP PPP sum ranks of missed 6-10
2	-1e+09	76
3	-0.11669941	-0.11669941	0
163	0	COMP PPP sum ranks of missed 11-15
3	-1e+09	105	110
4	-0.073905219	-0.13617459	-0.073905219	0
164	0	COMB PPP observed rank of predicted rank 1
6	-1e+09	2	3	4	5	7
7	0.012422913	0.17102399	0.12272873	0.055294636	0.0056146694	-0.015633683	-0.10690719
165	0	COMB PPP observed rank of predicted rank 2
4	-1e+09	0	4	5
5	-0.048408571	-0.0090262264	0.11517919	-0.032486508	-0.10126028
169	0	COMB PPP observed rank of predicted rank 6
3	-1e+09	2	8
4	-0.015036561	-0.015036561	0.009296974	-0.015036561
171	0	COMB PPP predicted rank of observed rank 1
3	-1e+09	2	5
4	0.0060950727	0.13157223	0.086635858	-0.10431256
172	0	COMB PPP predicted rank of observed rank 2
6	-1e+09	0	3	4	18	25
7	0.0093961576	0.045954832	0.068448721	-0.070687749	-0.098150553	-0.041806623	-0.018707198
174	0	COMB PPP predicted rank of observed rank 4
3	-1e+09	0	24
4	-0.05107326	-0.05107326	0.031493841	-0.05107326
176	0	COMB PPP predicted rank of observed rank 6
5	-1e+09	3	15	30	33
6	-0.06194073	-0.06194073	0.065477839	0.040717848	-0.023487758	-0.06194073
177	0	COMB PPP predicted rank of observed rank 7
3	-1e+09	1	14
4	-0.0069026566	-0.0069026566	0.002688973	-0.0069026566
178	0	COMB PPP rank of missed #1
3	-1e+09	1	2
4	0	-0.038362978	-0.021428732	0
179	0	COMB PPP rank of missed #3
5	-1e+09	2	4	8	11
6	0	0	-0.0099294434	-0.025538526	-0.044761385	0
180	0	COMB PPP rank of missed #5
2	-1e+09	16
3	-0.2382643	-0.42540525	0
183	0	COMB PPP rank of missed #11
2	-1e+09	19
3	0	-0.054462493	0
187	0	COMB PPP delta score #1
3	-1e+09	1.1138473	2.219943
4	0.038009276	0.074901954	0.10426629	0
188	0	COMB PPP delta score #2
3	-1e+09	0.42568398	1.8022366
4	0.019001469	0.019001469	0	0.019001469
190	0	COMB PPP delta score #4
6	-1e+09	-0.73465538	1.418169	1.5625787	1.7073889	1.8577471
7	0.12220072	0.2320903	0.25337201	0.21746356	0.13319031	0.038807313	0
191	0	COMB PPP delta score #5
3	-1e+09	-0.81098366	1.8058243
4	-0.045204365	-0.045204365	0	-0.045204365
194	0	COMB PPP dot prod pred-obs top 15
5	-1e+09	0.56831318	0.64066058	0.67115289	0.7070511
6	-0.043389542	-0.14773886	-0.11050338	-0.060401415	-0.017055816	0.078928593
195	0	COMB PPP dot prod obs-pred top 15
2	-1e+09	0.90698636
3	0.0018461182	-0.00046292787	0.0032490378
196	0	COMB PPP dot prod pred-obs top 30
3	-1e+09	0.54088068	0.58078825
4	0.016654246	-0.12803182	0.048658414	0.12143154
