10

dir
25
svn+ssh://gh1985im.ucsd.edu/home/user/svn/project/cycloquest/src/PepNovo
svn+ssh://gh1985im.ucsd.edu/home/user/svn



2011-08-24T19:37:29.321108Z
23
hosein














12859f52-5b58-4005-bb4c-c7dd9d571a0b

AminoAcidProbs.h
file




2011-07-11T01:02:01.486524Z
016a3ad4beccc4f54e49f35db71eff0c
2011-07-11T00:43:35.582477Z
1
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15471

MSBlastMapFile.cpp
file




2011-07-11T01:02:01.486524Z
c3cf2f2af4ea6128eff88922b0bfbf58
2011-07-11T00:43:35.582477Z
1
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6137

SpectraAggregator.cpp
file




2011-07-11T01:02:01.486524Z
3a37fb093a8a50bd6d4b964af16bd0ad
2011-07-11T00:43:35.582477Z
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4490

Config.cpp
file




2011-07-11T01:02:01.490524Z
35c54e916b241eb741d9eca9b226daf9
2011-07-11T00:43:35.582477Z
1
root
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59187

RegionalPrmNodeScoreModel.h
file




2011-07-11T01:02:01.490524Z
b68c71c11352dfaea5184850987c25a4
2011-07-11T00:43:35.582477Z
1
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3713

AllScoreModels.cpp
file




2011-07-11T01:02:01.490524Z
10b1e9f5a94c07e06ec2b581d6fb7c69
2011-07-11T00:43:35.582477Z
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8824

PeakRankStats.cpp
file




2011-07-11T01:02:01.490524Z
640444be79a80b5855cb41582928257e
2011-07-11T00:43:35.582477Z
1
root
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30621

QuickClustering.cpp
file




2011-07-11T01:02:01.490524Z
975328bf692bb4b85922a6dfc22e14c7
2011-07-11T00:43:35.582477Z
1
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1448

PeakList.cpp
file




2011-07-11T01:02:01.494524Z
bcbfb5239ccf9483d4038b36a35cd38a
2011-07-11T00:43:35.582477Z
1
root
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29189

CumSeqProb_train.cpp
file




2011-07-11T01:02:01.494524Z
f0421e9aa782b62bc926a54266b397f6
2011-07-11T00:43:35.582477Z
1
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3520

MassRangeMap.cpp
file




2011-07-11T01:02:01.494524Z
3a141c20ef13928ee6a3d708c6520c13
2011-07-11T00:43:35.582477Z
1
root
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4591

PeakRank_advanced.cpp
file




2011-07-11T01:02:01.498525Z
7d4f07b3ce70a8bf095c7ff33fdd82f4
2011-07-11T00:43:35.582477Z
1
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38326

AdvancedScoreModel.cpp
file




2011-07-11T01:02:01.498525Z
0fe6c9dfc1a64d04025a14466ba28651
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1
root
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7771

DeNovoDp.h
file




2011-07-11T01:02:01.498525Z
d7937fcf5d29e515dbf4459ec659456b
2011-07-11T00:43:35.582477Z
1
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2110

SiteParseRun.cpp
file




2011-07-11T01:02:01.498525Z
24ca002a705b5fffcf47ce9e17f055bd
2011-07-11T00:43:35.582477Z
1
root
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7254

DbFile.cpp
file




2011-07-11T01:02:01.498525Z
3e20c86de7a42e6aa534fbb4e3e820cf
2011-07-11T00:43:35.582477Z
1
root
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23544

PMCSQS_model.cpp
file




2011-07-11T01:02:01.502524Z
8d202c769e84f0bb662f19f66cbd28e1
2011-07-11T00:43:35.582477Z
1
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58954

QCDAT.cpp
file




2011-07-11T01:02:01.502524Z
20bf954fc344e6124beef22add4633ae
2011-07-11T00:43:35.582477Z
1
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40459

SpectraList.cpp
file




2011-07-11T01:02:01.502524Z
040742381318984755669046b49faf17
2011-07-11T00:43:35.582477Z
1
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4673

ME_REG.cpp
file




2011-07-11T01:02:01.502524Z
961fab039347381954a4ddd97d228eaf
2011-07-11T00:43:35.582477Z
1
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10331

mloperator_selection.h
file




2011-07-11T01:02:01.502524Z
98c435f80acff1dd18cd86a07a3bdc2c
2011-07-11T00:43:35.582477Z
1
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3822

Spectrum.cpp
file




2011-07-11T01:02:01.502524Z
c9a6bde4e42a1aeb1765d6e2a7d271e8
2011-07-11T00:43:35.582477Z
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30731

MultiPath.cpp
file




2011-07-11T01:02:01.502524Z
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2011-07-11T00:43:35.582477Z
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42905

DatFile.cpp
file




2011-07-11T01:02:01.506523Z
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2011-07-11T00:43:35.582477Z
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19190

PeptideComp.cpp
file




2011-07-11T01:02:01.506523Z
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2011-07-11T00:43:35.582477Z
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5178

FragmentSelection.cpp
file




2011-07-11T01:02:01.506523Z
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23522

CumulativeSeqProb.cpp
file




2011-07-11T01:02:01.506523Z
14ee9894bdc61395ed526c00399d6175
2011-07-11T00:43:35.582477Z
1
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25533

MSBlast.h
file




2011-07-11T01:02:01.506523Z
f3d7fb5062c22be165afe6e54bf8bcc3
2011-07-11T00:43:35.582477Z
1
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7614

includes.h
file




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5db44a07cc21ab7d23d043c2b7ed27ca
2011-07-11T00:43:35.582477Z
1
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3599

PepNovo_auxfun.cpp
file




2011-07-11T01:02:01.510523Z
5e7faa81a774cdef8482851004c6e901
2011-07-11T00:43:35.582477Z
1
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3831

PrmGraph.cpp
file




2011-07-11T01:02:01.510523Z
0e2a5b84ae84600b51fed44bdd8c2701
2011-07-11T00:43:35.582477Z
1
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83336

DeNovoRankModel.h
file




2011-07-11T01:02:01.510523Z
fdf5dec4e7192c734bd8df93c0479ae3
2011-07-11T00:43:35.582477Z
1
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98

PmcsqsAdditionalFunctions.h
file




2011-07-11T01:02:01.510523Z
3581d7da2237f8523af9adeef7e29afc
2011-07-11T00:43:35.582477Z
1
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3137

AnnotatedSpecturm.cpp
file




2011-07-11T01:02:01.510523Z
bc3903c8e0605c77de9d7fca9cf170a6
2011-07-11T00:43:35.582477Z
1
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14876

FastaDB_old.cpp
file




2011-07-11T01:02:01.510523Z
6aeab489bd7f504c27f92cadbd656c4a
2011-07-11T00:43:35.582477Z
1
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62016

ME_REG.h
file




2011-07-11T01:02:01.514526Z
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2011-07-11T00:43:35.582477Z
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9097

DeNovoRankTrain.cpp
file




2011-07-11T01:02:01.514526Z
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2011-07-11T00:43:35.582477Z
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86431

FastaDB.cpp
file
26



2011-08-31T19:14:24.881056Z
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2011-08-31T20:32:21.094345Z
26
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95761

RegularFragmentModel.cpp
file




2011-07-11T01:02:01.514526Z
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2011-07-11T00:43:35.582477Z
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22344

PMCSQS.cpp
file




2011-07-11T01:02:01.514526Z
e2ab5c489262455d88034021676e1be3
2011-07-11T00:43:35.582477Z
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61958

MSB_cand.cpp
file




2011-07-11T01:02:01.514526Z
a9f1d312ad8e6b70938e4211ec3c0421
2011-07-11T00:43:35.582477Z
1
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75483

SpectraFile.h
file




2011-07-11T01:02:01.518524Z
b157ffbe936a6c9c0c7757bf39701926
2011-07-11T00:43:35.582477Z
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4119

Spectrum.h
file




2011-07-11T01:02:01.518524Z
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2011-07-11T00:43:35.582477Z
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10886

AnnotatedSpectrum_add.cpp
file
27



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8ffc80153031beef92e8f200d5d54172
2011-09-04T01:28:56.312814Z
27
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7706

AnnotationFile.cpp
file




2011-07-11T01:02:01.518524Z
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2011-07-11T00:43:35.582477Z
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3422

DeNovoSolutions.cpp
file




2011-07-11T01:02:01.518524Z
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2011-07-11T00:43:35.582477Z
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92046

CumulativeSeqProb.h
file




2011-07-11T01:02:01.518524Z
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2011-07-11T00:43:35.582477Z
1
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8207

ME_Regression_Model.cpp
file




2011-07-11T01:02:01.522532Z
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7151

StrongFragmentModel.cpp
file




2011-07-11T01:02:01.522532Z
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56959

PeakRankModel.h
file




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2011-07-11T00:43:35.582477Z
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16757

MetaList.cpp
file




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1278

mlfeature.cpp
file




2011-07-11T01:02:01.522532Z
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3587

mloperator.cpp
file




2011-07-11T01:02:01.527522Z
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10527

ScanList.h
file




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1772

PeptideRankScorer.h
file




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12651

QCAnnotatedMgf.cpp
file




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8458

PeakRank_combined.cpp
file




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46889

QuickClusteringSpectra.cpp
file




2011-07-11T01:02:01.527522Z
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2011-07-11T00:43:35.582477Z
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5506

PeakRank_combined_dnv.cpp
file




2011-07-11T01:02:01.527522Z
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2011-07-11T00:43:35.582477Z
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14997

mlauxfun.h
file




2011-07-11T01:02:01.531522Z
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3817

PeakRank_simple.cpp
file




2011-07-11T01:02:01.531522Z
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7263

ME_Regression_DataSet.cpp
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2011-07-11T01:02:01.531522Z
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17502

FastaDB_old.h
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2011-07-11T01:02:01.531522Z
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18124

Config.h
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23999

FragProbTable.cpp
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9585

RegularFragmentModel.h
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10351

PMCSQS.h
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2011-07-11T01:02:01.535522Z
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2011-07-11T00:43:35.582477Z
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14289

SingleSpectrumHeader.cpp
file




2011-07-11T01:02:01.535522Z
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2011-07-11T00:43:35.582477Z
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16734

AnnotationFile.h
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1040

DeNovoSolutions.h
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7395

PMCSQSRanking.cpp
file




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23

BasicDataStructs_add.h
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1373

PrmNodeScoreModel.cpp
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26456

FileManagement.h
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16246

ConversionTables.h
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1757

EdgeModel.cpp
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32529

cluster_main.cpp
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15429

MetaList.h
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855

base64.h
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310

DbFile.h
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3900

mlauxfun.cpp
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1371

PeakRank_main.cpp
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5260

RankBoost.cpp
file




2011-07-11T01:02:01.551612Z
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68041

DeNovoPartModel.cpp
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77595

SpectraList.h
file




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1558

mllib.h
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170

AnnotatedSpectrum.h
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2024

Isotopes.cpp
file




2011-07-11T01:02:01.551612Z
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2442

PTM_stuff.cpp
file




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18604

BasicDataStructs.h
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16510

BasicDataStructs_add.cpp
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2649

PeptideComp.h
file




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1659

FragmentSelection.h
file




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2010

mldataset.cpp
file




2011-07-11T01:02:01.555523Z
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7654

FragProbTable.h
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3575

PepNovo_includes.h
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1823

MSBlastGeneration.cpp
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1425

MSBSequenceSet.cpp
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69336

PmcsqsAdditionalFunctions.cpp
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16103

PartitionModel.cpp
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29778

MZXML_parsing.cpp
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27394

RegionalPepNovoModel.h
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1540

Fragmentation.cpp
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17302

QCoutputter.cpp
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3315

BasicDataStructs.cpp
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14001

FastaFile.h
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1154

SpectrumPeakList.h
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1276

RankBoost.h
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15191

ReScoreDB.cpp
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17218

QCDotProdSim.cpp
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5600

PeakRank_exp.cpp
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1605

SpectraAggregator.h
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2730

AllScoreModels.h
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7059

ScanList.cpp
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4248

QuickClustering.h
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25368

PeakList.h
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6628

PeptideRankScorer_old.cpp
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85647

PeptideRankScorer.cpp
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43759

StrongFragmentModel.h
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17559

mzXML2mgf_main.cpp
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1551

paper_plots.cpp
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23

FragmentModel.h
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3069

mloperator_selection.cpp
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1645

PepNovo_main.cpp
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26038

PMC_rank.cpp
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58347

shorty.h
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0

AdvancedScoreModel_regional.cpp
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26852

Fragmentation.h
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8538

MSBlast.cpp
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45607

auxfun.cpp
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16827

MSBlastCollector.cpp
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46941

FileManagement.cpp
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69578

DatFile.h
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5505

ConversionTables.cpp
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4671

PepNovo_auxfun.h
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415

SingleSpectrumHeader.h
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6185

base64.cpp
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5855

main.cpp
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22829

PrmGraph.h
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15153

PrmNodeScoreModel.h
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1791

PeptideRankScorer_old.h
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14636

AllSpectraHolder.cpp
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0

AminoAcidProbs.cpp
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61931

EdgeModel.h
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4589

AnnotatedSpectrum.cpp
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15077

SpectraFile.cpp
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22825

RegionalPrmNodeScoreModel.cpp
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27390

QCBasicSpecReader.cpp
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18871

RankBoostSample.cpp
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17467

mldata.h
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2671

FastaDB.h
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24191

MSBlastKeywordFile.cpp
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2007

DeNovoRank_main.cpp
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9033

Isotopes.h
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299

MSBSequence.cpp
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9235

auxfun.h
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9232

PeakRankModel.cpp
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56470

AnnotatedSpectrum_add.h
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1745

DeNovoDp.cpp
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36228

PeakRankStats.h
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613

PeakRankPartialDenovo.cpp
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24766

RegionalPepNovoModel.cpp
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4195

mlfeature.h
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2539

mloperator.h
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4851

PepNovo_bin
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3102105

