GenoMS : Sequencing whole proteins using a template databases

Installation Guide

Required Software

  • InsPecT - a tool for identifying MS/MS spectra using a protein database. The InsPecT software and documentation can be found here
  • PepNovo+ - a tool for converting MS/MS spectra to Prefix Residue Mass (PRM) spectra. The PepNovo software and documentation can be found here

    • Recommended Software

  • MSCluster - a tool for combining spectra for the same peptide, thereby increasing spectral quality. The MSCluster software and documentation can be found here
  • MS-GF - a tool for rescoring peptide-spectrum matches in a database-independent manner. The MS-GF software and documentation can be found here