Serialized Form
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Package org.systemsbiology.jrap.stax |
header
ScanHeader header
massIntensityList
double[][] massIntensityList
- No matter 32-bit or 64-bit peak pair, return as double list.
Support mzXML
doubleMassList
double[] doubleMassList
- No matter 32-bit m/z or 64 bit m/z return as a double list
Support for mzML
doubleIntensityList
double[] doubleIntensityList
num
int num
- Scan Number
msLevel
int msLevel
- MS Scan Level
peaksCount
int peaksCount
- Number of peaks in scan
polarity
java.lang.String polarity
- TODO: Describe
scanType
java.lang.String scanType
- TODO: Describe
centroided
int centroided
- TODO: Describe
deisotoped
int deisotoped
- TODO: Describe
chargeDeconvoluted
int chargeDeconvoluted
- TODO: Describe
retentionTime
java.lang.String retentionTime
- TODO: Describe
rt
double rt
- for mzML
startMz
float startMz
- TODO: Describe
endMz
float endMz
- TODO: Describe
lowMz
float lowMz
- TODO: Describe
highMz
float highMz
- TODO: Describe
basePeakMz
float basePeakMz
- TODO: Describe
basePeakIntensity
float basePeakIntensity
- TODO: Describe
totIonCurrent
float totIonCurrent
- TODO: Describe
precursorMz
float precursorMz
- TODO: Describe
precursorScanNum
int precursorScanNum
- TODO: Describe
precursorCharge
int precursorCharge
- TODO: Describe
precursorIntensity
float precursorIntensity
collisionEnergy
float collisionEnergy
- TODO: Describe
ionisationEnergy
float ionisationEnergy
- TODO: Describe
precision
int precision
- TODO: Describe
filterLine
java.lang.String filterLine
- for S(M)RM
byteOrder
java.lang.String byteOrder
- Peaks attribute for mzXML_3.0
contentType
java.lang.String contentType
compressionType
java.lang.String compressionType
compressedLen
int compressedLen
massPrecision
int massPrecision
- for mzML
massCompressionType
java.lang.String massCompressionType
massCompressedLen
int massCompressedLen
intenPrecision
int intenPrecision
intenCompressionType
java.lang.String intenCompressionType
intenCompressedLen
int intenCompressedLen