This software is Copyright © 2013 The Regents of the University of
California. All Rights Reserved.

This product includes software developed by
The Apache Software Foundation (http://www.apache.org/), under Apache
Software License version 2, including
* Apache Tomcat 6.0.29 (http://tomcat.apache.org/)
* Apache Commons components: (http://commons.apache.org/)
	* CLI 1.2
	* Codec 1.5
	* Collections 3.2.1
	* Compress 1.1
	* FileUpload 1.2.1
	* IO 2.0.1
	* Lang 2.6
	* Logging 1.1.1
	* Validator 1.3.1
* Apache James Mime4j 0.6 (http://james.apache.org/mime4j/)
* Apache Geronimo javamail-1.4 spec. 1.7.1 (http://geronimo.apache.org/)
* Apache HttpComponents: (http://hc.apache.org/) 
	* httpclient 4.1.1
	* httpcore 4.1.1
	* httpmime 4.1.1
* Apache Xerces2 Java Parser 2.9.1 (http://xerces.apache.org/)
* Apache Logging Services: log4j 1.2.16 (http://logging.apache.org/log4j)
  
This product includes software under BSD style license, including:
* JCraft JSch Java secure Channel 0.1.44-1 (http://www.jcraft.com/jsch/)
* HyperSQL HSQLDB 2.2.2 (http://hsqldb.org/) 

This product includes software under MIT License:
* SLF4J 1.6.1 (http://www.slf4j.org/)

Workflow progress diagrams are generated by the "dot" tool of Graphviz
(http://www.graphviz.org/), under Eclipse Public License version 1.0.

The home-made tool SpecPlot uses staticly-compiled version of Gnuplot
version 4.2.5 (http://www.gnuplot.info/) for Linux releases.  Gnuplot source
code is compiled without any modification.

Windows releases of SpecPlot use and include Cygwin DLLs and gnuplot
compiled under Cygwin.  Cywgin (http://www.cygwin.com/) is under GNU General
Plubic License version 3.

The system uses Roy Liu's Dapper library (http://code.google.com/p/shared/).
Roy was a member of UCSD Proteomics group and was kind to offer the library
to implement the workflow engine of ProteoSAFe.