Center for Computational Mass Spectrometry

Datasets

In addition to providing tools and algorithms in computational mass spectrometry, CCMS also participates in the acquisition and dissemination of datasets of special interest for the development of computational approaches. These include datasets in CCMS co-authored publications or research projects.

MSV000078544: Combinatorial Approach for Large-scale Identification of Linked Peptides from MS/MS Spectra
12 (2.90 GB). February 2, 2014. PMID:24493012.
MSV000078543: A Turn-key Approach for Large-scale Identification of Complex Post-translational Modifications
9 (1.75 GB). February 2, 2014. PMID:24437954.
MSV000078542: Peptide identification from mixture tandem mass spectra
17 (3.47 GB). February 2, 2014. PMID:20348588.
MSV000078532: MODa: Fast multi-blind modification search through tandem mass spectrometry
5 (3.23 GB) . January 1, 2014.
MSV000078519: CPTAC Study5 Study6 Study8 SOP Runs
782 (118.83 GB) . January 1, 2014.
MSV000078493: Shotgun protein sequencing: Assembly of MS/MS spectra from mixtures of modified proteins.
11 (1.11 GB). November 11, 2014.
MSV000078436: Upload for CID/HCD/ETD MetaSPS paper (JPR, 2013)
12 files (1.64 GB) . May 5, 2013.
MSV000078492: Proteome Informatics Research Group (iPRG)_2012: A Study on Detecting Modified Peptides in a Complex Mixture
138 (754.26 MB). November 11, 2014. PMID: 24187338. .
MSV000078530: Upload for 2012 MCP manuscript - "Shotgun protein sequencing with meta-contig assembly."
17 (1.55 GB) . January 1, 2014.
MSV000078529: RECOMB 2014 - "The generating function approach for peptide identification in spectral networks"
7 (24.58 GB) . January 1, 2014.
MSV000078556: GNPS - Topobiographical molecular analysis of the skin from a man and a woman. MS/MS Data
1,067 (60.41 GB) . February 2, 2014.
MSV000078523: Human Lens Dataset
299 (3.09 GB) . January 1, 2014.
MSV000078552: GNPS - MS/MS networking guided analysis of molecule and gene cluster families - Figure 1
60 (1.19 GB) . February 2, 2014.
MSV000078551: GNPS - MS/MS networking guided analysis of molecule and gene cluster families - Figure 4
4 (50.58 MB) . February 2, 2014.
MSV000078548: GNPS - Molecular networking as a dereplication strategy-Figure 3
37 (939.46 MB) . February 2, 2014.
MSV000078547: GNPS - Molecular networking as a dereplication strategy -Figure 4
26 (465.52 MB) . February 2, 2014.