Presented in 2015
GNPS - a Preview of the Future of Community Wide Collaboration and the Power of Social Networking
Mingxun Wang, Pieter Dorrestein, and Nuno Bandeira
Jan 2015Plant and Animal Genomics Conference XXIII 2015. TalkPresented in 2013
Spectral Library Generating Function for Assessing Spectrum-Spectrum Match Significance
Mingxun Wang and Nuno Bandeira
March 2013 RECOMB-CP. Conference talkMassIVE: Mass Spectrometry Interactive Virtual Environment for Data Sharing in Proteomics
Jeremy Carver, Ian Kaufman, Claudiu Farcas, Vineet Bafna, Nuno Bandeira
June 2013 ASMS . PosterBeyond Exact match Spectral Library Search: Mutation Tolerant Search
Mingxun Wang, Antonius Koller, and Nuno Bandeira
June 2013 ASMS. PosterPresented in 2012
Spectral Library Generating Function for Assessing Spectrum-Spectrum Match Significance
Mingxun Wang and Nuno Bandeira
June 2012 ASMS. PosterApproach For Large-Scale Identification of Linked Peptides from Tandem Mass Spectra
Jian Wang, Veronica Anania, Jeff Knott, John Rush, Jennie R. Lill, Philipe E. Bourne, Nuno Bandeira
June 2012 ASMS. PosterMixGF: spectral probability for mixture spectra of more than one peptides
Jian Wang, Philipe E. Bourne, Nuno Bandeira
June 2012 ASMS. PosterApproach For Large-Scale Identification of Linked Peptides
Jian Wang, Veronica Anania, Jeff Knott, John Rush, Jennie R. Lill, Philipe E. Bourne, Nuno Bandeira
April 23, 2012 CNPN. Conference talkApproach For Large-Scale Identification of Disulfide-bridged Peptides from Tandem Mass Spectra
Jian Wang, Veronica Anania, Jeff Knott, John Rush, Jennie R. Lill, Philipe E. Bourne, Nuno Bandeira
March 2012 RECOMB-CP. PosterSpectral Alignment with Adaptive Penalties for Post-Translational Modifications and Mutations
Laurence E. Bernstein, Nuno Bandeira
June 2012 ASMS. PosterA tour of MS-GF+: A Universal and Sensitive MS/MS Database Search Engine
Sangtae Kim
April 6, 2012 RECOMB-CP. TutorialProteoSAFe: A Scalable, Accessible, and Flexible Software Environment for Proteomics Analysis
Jeremy Carver, Mingxun Wang
April 6th, 2012 RECOMB-CP. TutorialThe ProteoSAFe Platform for High-Performance Discovery Proteomics
To-ju Huang, Jeremy Carver, Claudiu Farcas, Roy Liu, Natalie Castellana, Sangtae Kim, Ari Frank, Jian Wang, Xiaowen Liu, João Canhita, Binal Patel, Pavel A. Pevzner, Vineet Bafna, Ingolf H. Krüger, Nuno Bandeira*
May 23, 2012ASMS. PosterPresented in 2011
Peptide Identifications in SWATH-MS using Spectral Library Search
Jian Wang, Monika Tucholska, Brett Larsen, Stephen Tate, Anne-Claude Gingras, Nuno Bandeira
June 2011 ASMS. PosterA turn-key approach for large-scale identification of SUMOylated peptides from tandem mass spectra
Jian Wang, Veronica Anania, Jeff Knott, John Rush, Jennie R. Lill, Philipe E. Bourne, Nuno Bandeira*
June 2011 ASMS. PosterSpectral Library Search and Identification of Mixture Tandem Mass Spectra
Jian Wang
March, 2011 RECOMB-CP. TutorialPeptide Identifications from Mixture Tandem Mass Spectra
Jian Wang, Josue Perez, John Katz, Parag Mallick, Philipe E. Bourne, Nuno Bandeira
June, 2011 ASMS. PosterExposing the target-decoy approach for peptide identification: lessons from examples
Sangtae Kim
March 11, 2011 RECOMB-CP. TutorialDeconvolution and Database Search of Complex Top-Down Tandem Mass Spectra
Xiaowen Liu
March 11, 2011 RECOMB-CP. TutorialProteogenomics: using mass spectrometry for genome and proteome annotation.
Natalie Castellana
March 2011 RECOMB-CP. TutorialPresented in 2010
A Database Search Method for Identifying Mixture Tandem Mass Spectra
Jian Wang, Philipe E. Bourne, Nuno Bandeira*
June 2010 ASMS. PosterProteogenomics: using mass spectrometry for genome and proteome annotation.
Natalie Castellana
March 2010 RECOMB-CP. TutorialDereplication and Sequencing of Cyclic Non-Ribosomal Peptides Using Mass Spectrometry
Julio Ng
March 26, 2010 RECOMB-CP. TutorialAssigning statistical significance to peptide/protein identifications
Sangtae Kim
March 26, 2010 RECOMB-CP. TutorialPresented in
Towards Extensive Characterization of All Variation in the Human Proteome
Nuno Bandeira
RECOMB-CP. Conference talk